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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9224810_9225543_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9224810 - 9225543

Intron Length:

734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCATTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTCGCTTTCATT

Flanking Amino Acid:

TSKQKCFELQALLEEERRAY

Intron Amino Acid Position:

541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

82.3

0.73

0.7

77.6

29.8

Minor 5ss

31.1

-2.2

3.2

41.7

Minor BPS

0.27

1.9

74.65

43.4

Associated Gene:

Gene:

SLMAP

Ensembl Gene ID:

ENSAPLG00000008635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028758

9158835 - 9239829

80995

ENSAPLT00000026756

9158835 - 9238718

79884

ENSAPLT00000017347

9158835 - 9239829

80995

ENSAPLT00000009071

9158835 - 9239829

80995