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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9225619_9230331_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9225619 - 9230331

Intron Length:

4713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GTATGTTTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTTATAAAAATT

Flanking Amino Acid:

ESNKQINVLQAQLRRLQEDI

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

82.4

29.8

Major BPS

78.6

0.71

78.6

Major PPT

78.5

0.64

69.4

45.8

Minor 5ss

41.2

-1

2.9

57.1

47.2

Minor BPS

45.1

-0.3

2.1

70.39

40.6

Associated Gene:

Gene:

SLMAP

Ensembl Gene ID:

ENSAPLG00000008635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027094

9158835 - 9239829

80995

ENSAPLT00000026756

9158835 - 9238718

79884

ENSAPLT00000017347

9158835 - 9239829

80995

ENSAPLT00000009071

9158835 - 9239829

80995

ENSAPLT00000028758

9158835 - 9239829

80995