Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_9324319_9325591_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9324319 - 9325591

Intron Length:

1273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTAACTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TCCGTCTTAACT

Flanking Amino Acid:

NITYGGEHIPGSPFKVPVKD

Intron Amino Acid Position:

1500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.8

0.9

74.3

34.1

Major BPS

81.9

0.79

0.8

81.9

Major PPT

79.9

0.67

0.9

70.3

Minor 5ss

33.2

-1.9

3.4

45.7

43.4

Minor BPS

70.5

0.72

1.4

78.66

44.1

Associated Gene:

Gene:

FLNB

Ensembl Gene ID:

ENSAPLG00000009572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029110

9281290 - 9348717

67428

ENSAPLT00000010001

9281290 - 9348717

67428

ENSAPLT00000047129

9268464 - 9348717

80254

ENSAPLT00000036841

9281290 - 9348717

67428

ENSAPLT00000031964

9281290 - 9348717

67428