Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_9327530_9328167_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9327530 - 9328167

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTAAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAT

U12 Branch Point Sequence:

TTTTTCTTAAAG

Flanking Amino Acid:

VKYADEEIPRSPFKVKVLPT

Intron Amino Acid Position:

1626

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

70.4

42.5

Major BPS

69.2

0.48

1.3

69.7

44.2

Major PPT

84.7

0.78

0.9

86.6

Minor 5ss

36.1

-1.6

3.3

46.8

48.5

Minor BPS

77.9

0.74

1.4

80.39

35.1

Associated Gene:

Gene:

FLNB

Ensembl Gene ID:

ENSAPLG00000009572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031964

9281290 - 9348717

67428

ENSAPLT00000029110

9281290 - 9348717

67428

ENSAPLT00000010001

9281290 - 9348717

67428

ENSAPLT00000047129

9268464 - 9348717

80254

ENSAPLT00000036841

9281290 - 9348717

67428