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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9332300_9332970_F


Intron Information:

Intron Rank:
30

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
9332300 - 9332970

Intron Length:
671

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGCCAG

5'SS Class:
major

3'SS Sequence:
TACCACCAACCAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
GAATAAT

U12 Branch Point Sequence:
TAATGCCTAACC

Flanking Amino Acid:
DIPNSPFTVMAVDADAVAVQ

Intron Amino Acid Position:
1825

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79
0.68
1
61.5
44.7

Major BPS
62.3
0.31
1.3
64.3
39.7

Major PPT
57.3
0.16
1
48.6
38.9

Minor 5ss
37.4
-1.4
3.1
44.4
44.4

Minor BPS
54.5
0.12
2.1
69.58
41.2

Associated Gene:

Gene:
FLNB

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9268464 - 9348717
80254

9281290 - 9348717
67428

9281290 - 9348717
67428

9281290 - 9348717
67428