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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9420938_9438816_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9420938 - 9438816

Intron Length:

17879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAGA

5'SS Class:

major

3'SS Sequence:

TTGTGTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

AGTACAGTAACG

Flanking Amino Acid:

APASYLQRLQVLEQDVVLQS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

42.7

Major BPS

54.4

0.11

1.2

36.4

Major PPT

82.1

0.72

0.9

80.5

Minor 5ss

31.9

-2.1

3.1

39.5

46.1

Minor BPS

46.2

-0.4

2.3

56.96

43.8

Associated Gene:

Gene:

NCKIPSD

Ensembl Gene ID:

ENSAPLG00000015035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035993

9420627 - 9466798

46172