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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9439863_9443507_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9439863 - 9443507

Intron Length:

3645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGCA

5'SS Class:

major

3'SS Sequence:

TCTTCCCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTGCTCTGAAAT

Flanking Amino Acid:

FEEEDEGPYQIPPQPRRAAP

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

68.7

36.4

Major BPS

0.85

0.9

39.9

Major PPT

86.4

0.82

0.7

80.2

25.2

Minor 5ss

36.3

-1.6

3.3

48.6

47.1

Minor BPS

58.7

0.35

1.6

75.58

40.6

Associated Gene:

Gene:

NCKIPSD

Ensembl Gene ID:

ENSAPLG00000015035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038713

9420627 - 9466798

46172

ENSAPLT00000035993

9420627 - 9466798

46172