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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9453630_9454426_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9453630 - 9454426

Intron Length:

797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATCTAATGAATT

Flanking Amino Acid:

VLSLVAYYQMEHRVPLRLLL

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

63.1

43.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

1.1

0.4

13.8

Minor 5ss

36.3

-1.6

3.3

43.6

Minor BPS

1.9

69.76

40.9

Associated Gene:

Gene:

NCKIPSD

Ensembl Gene ID:

ENSAPLG00000015035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035993

9420627 - 9466798

46172

ENSAPLT00000015677

9444481 - 9465407

20927

ENSAPLT00000038713

9420627 - 9466798

46172