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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9459585_9460869_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9459585 - 9460869

Intron Length:

1285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

AGTGCTGTAAAT

Flanking Amino Acid:

MGEPLPYHHYEHLNSQFVQF

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.1

35.7

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

80.3

0.68

0.9

32.4

Minor 5ss

31.2

-2.1

3.3

40.6

45.1

Minor BPS

47.7

-0

2.2

68.04

42.8

Associated Gene:

Gene:

NCKIPSD

Ensembl Gene ID:

ENSAPLG00000015035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038713

9420627 - 9466798

46172

ENSAPLT00000035993

9420627 - 9466798

46172

ENSAPLT00000015677

9444481 - 9465407

20927