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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9493178_9493281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9493178 - 9493281

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAT

U12 Branch Point Sequence:

CCATCCGTGACG

Flanking Amino Acid:

FSVGIMHLPQGLAYALLAGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

52.1

0.05

1.2

62.1

35.8

Major PPT

64.9

0.34

56.7

43.3

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

49.1

-0.2

2.2

54.78

46.6

Associated Gene:

Gene:

SLC26A6

Ensembl Gene ID:

ENSAPLG00000001968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001965

9492793 - 9497900

5108