Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_9494955_9495046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9494955 - 9495046

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGCTC

5'SS Class:

major

3'SS Sequence:

TCTGTCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGCAG

U12 Branch Point Sequence:

TTTTCCCCGACC

Flanking Amino Acid:

KHGYKVDSNQELIALGLSNF

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

65.8

39.9

Major BPS

45.5

-0.2

1.7

60.7

45.9

Major PPT

78.7

0.65

0.8

31.8

Minor 5ss

29.9

-2.3

3.4

41.5

45.2

Minor BPS

61.3

0.34

1.9

79.51

35.5

Associated Gene:

Gene:

SLC26A6

Ensembl Gene ID:

ENSAPLG00000001968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001965

9492793 - 9497900

5108