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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9495518_9495622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9495518 - 9495622

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

TCCCCTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGAAAT

U12 Branch Point Sequence:

CACGGCTGAAAT

Flanking Amino Acid:

TLWKSNRVDLMIWIVTFVAT

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

56.6

42.5

Major BPS

54.8

0.12

1.3

62.7

40.5

Major PPT

80.5

0.69

0.7

72.4

32.3

Minor 5ss

29.8

-2.3

3.5

37.6

41.8

Minor BPS

43.2

-0.4

54.84

46.5

Associated Gene:

Gene:

SLC26A6

Ensembl Gene ID:

ENSAPLG00000001968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001965

9492793 - 9497900

5108