Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_9495913_9496076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9495913 - 9496076

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCACAT

U12 Branch Point Sequence:

GGTAGCACATGC

Flanking Amino Acid:

VYKDVAEYEKALEIPGVKIF

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

72.3

37.6

Major BPS

53.7

0.09

1.1

60.7

37.6

Major PPT

70.1

0.45

0.8

60.7

35.2

Minor 5ss

33.4

-1.9

3.6

46.6

48.7

Minor BPS

31.2

-1.4

2.1

38.07

39.4

Associated Gene:

Gene:

SLC26A6

Ensembl Gene ID:

ENSAPLG00000001968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001965

9492793 - 9497900

5108