Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_9497793_9497867_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9497793 - 9497867

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGACC

5'SS Class:

major

3'SS Sequence:

TCCTTCCTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAGAA

U12 Branch Point Sequence:

CCCAGCCGACCC

Flanking Amino Acid:

HISGEQHTAPSLQAQRSTKL

Intron Amino Acid Position:

714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

66.9

38.5

Major BPS

49.9

-0

1.1

46.7

38.9

Major PPT

82.2

0.72

0.7

80.3

Minor 5ss

28.6

-2.5

36.3

40.5

Minor BPS

33.5

-1.2

35.86

40.9

Associated Gene:

Gene:

SLC26A6

Ensembl Gene ID:

ENSAPLG00000001968

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001965

9492793 - 9497900

5108