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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9499550_9500028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9499550 - 9500028

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGCTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTGTTCTAATA

Flanking Amino Acid:

SEESSQPTCTVGVWIGAGSR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

76.1

35.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.5

0.44

69.2

Minor 5ss

40.8

-1

3.4

56.2

Minor BPS

50.2

1.7

63.76

37.2

Associated Gene:

Gene:

UQCRC1

Ensembl Gene ID:

ENSAPLG00000001974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001974

9498547 - 9507145

8599