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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9517962_9518045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9517962 - 9518045

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCCAG

5'SS Class:

major

3'SS Sequence:

TGCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTCAA

U12 Branch Point Sequence:

AAGGGGTGACCT

Flanking Amino Acid:

FAAVQYSDDPRVEFTFSQHA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

56.2

44.5

Major BPS

47.1

-0.1

1.4

49.1

46.3

Major PPT

67.9

0.4

0.8

58.1

33.2

Minor 5ss

32.3

-2

39.3

Minor BPS

34.1

-1.1

2.4

47.73

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034786

9517546 - 9532204

14659

ENSAPLT00000044325

9517390 - 9532204

14815