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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9519856_9520484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9519856 - 9520484

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGCACC

5'SS Class:

major

3'SS Sequence:

ATCCTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

ACGGCCTCATCC

Flanking Amino Acid:

AATATLTARTQRPAGVQHVA

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.3

69.7

41.3

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

68.8

0.42

0.9

61.9

34.1

Minor 5ss

-0.9

2.8

52.9

37.1

Minor BPS

46.2

-0.3

1.9

52.55

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659