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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9520605_9520698_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9520605 - 9520698

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTCCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCAAT

U12 Branch Point Sequence:

TCCTCCTCCAGC

Flanking Amino Acid:

GYRLSWAALAGQEQRKVELD

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

51.7

0.04

1.2

60.3

34.2

Major PPT

0.47

0.8

66.3

28.3

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

46.1

-0.3

2.2

57.93

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659