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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9522048_9522118_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9522048 - 9522118

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CCATCTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

CCCTCCCCACCC

Flanking Amino Acid:

GYRLTWRASDGQEQSRFLPA

Intron Amino Acid Position:

723

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.6

38.9

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

0.5

0.8

64.9

36.1

Minor 5ss

31.3

-2.1

3.3

40.9

45.3

Minor BPS

42.9

-0.5

2.1

50.84

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659