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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9522696_9522773_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9522696 - 9522773

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGCTCC

5'SS Class:

weak_major

3'SS Sequence:

CCTCTCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CCTGCCCTAACG

Flanking Amino Acid:

GNPVSIIVTTPEAAPVSPVS

Intron Amino Acid Position:

862

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.3

54.1

40.2

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

79.5

0.66

0.7

73.1

25.1

Minor 5ss

41.5

-0.9

2.9

55.9

41.8

Minor BPS

53.6

-0

1.9

59.58

47.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659