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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9523123_9523232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9523123 - 9523232

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

TCCCCCTCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAT

U12 Branch Point Sequence:

GCCACCCCATTC

Flanking Amino Acid:

SSPITVTAVTAAPGRVTSLR

Intron Amino Acid Position:

954

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

64.8

41.3

Major BPS

50.9

0.02

1.3

60.4

37.5

Major PPT

68.8

0.42

0.9

64.9

30.7

Minor 5ss

30.1

-2.3

3.5

41.6

45.3

Minor BPS

38.2

-0.9

1.9

40.66

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659