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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9524210_9524307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9524210 - 9524307

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGGGGA

5'SS Class:

major

3'SS Sequence:

GTTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

RYEEPSGNAIGAAITFARTY

Intron Amino Acid Position:

1131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

60.5

40.3

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

84.3

0.77

0.8

77.2

37.1

Minor 5ss

23.6

-3

3.3

43.5

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034786

9517546 - 9532204

14659

ENSAPLT00000044325

9517390 - 9532204

14815