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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9524452_9524545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9524452 - 9524545

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

GCTGCTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GGGTGCTGAGGG

Flanking Amino Acid:

IAAARDVKAAGVRVLAVGLE

Intron Amino Acid Position:

1179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

54.8

44.4

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

0.32

1.1

57.1

43.3

Minor 5ss

22.7

-3.1

3.2

37.8

Minor BPS

37.4

-1

2.1

37.67

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659