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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9524851_9524965_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9524851 - 9524965

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAC

U12 Branch Point Sequence:

CACCCCTTTACT

Flanking Amino Acid:

PKPCAVPCPKGDKGDPGEAG

Intron Amino Acid Position:

1247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

61.7

0.29

1.1

40.4

Major PPT

80.2

0.68

0.8

73.5

31.4

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

59.5

0.38

1.7

70.63

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659