Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_9525137_9525234_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9525137 - 9525234

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAATGTCC

5'SS Class:

major

3'SS Sequence:

TCTGCTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAC

U12 Branch Point Sequence:

CTGCCACCAAGC

Flanking Amino Acid:

PGQPGPPGEPGRHGLPGPPG

Intron Amino Acid Position:

1268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

60.7

Major BPS

-0.2

1.4

53.5

Major PPT

73.3

0.52

0.9

64.7

41.3

Minor 5ss

38.5

-1.3

3.2

52.2

44.6

Minor BPS

37.5

-0.9

2.1

46.07

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034786

9517546 - 9532204

14659

ENSAPLT00000044325

9517390 - 9532204

14815