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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9526460_9526575_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9526460 - 9526575

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGGATG

5'SS Class:

major

3'SS Sequence:

CTCTCTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

GCATCTCTGATG

Flanking Amino Acid:

PGRKGEPGTPGSPGPPGSPG

Intron Amino Acid Position:

1376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.52

1.1

64.9

46.4

Major BPS

0.72

38.9

Major PPT

81.6

0.71

0.7

73.1

31.8

Minor 5ss

35.3

-1.7

3.5

48.7

47.2

Minor BPS

-0.3

1.7

48.16

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659