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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9527190_9527279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9527190 - 9527279

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGCCCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

CCCATCTCACGG

Flanking Amino Acid:

AGTPGPKGEKGDGEDGLPGP

Intron Amino Acid Position:

1462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

69.8

0.45

0.8

65.6

30.4

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

36.3

-1.1

1.9

30.63

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659