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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9527340_9527418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9527340 - 9527418

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGACAT

U12 Branch Point Sequence:

CTCCCCCCACGG

Flanking Amino Acid:

PGRPGDPGDRGPRGPPGEQG

Intron Amino Acid Position:

1482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

49.9

-0

1.4

60.7

45.9

Major PPT

78.4

0.64

0.7

72.3

25.8

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

35.3

-1.2

2.1

37.31

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659