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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9527455_9527595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9527455 - 9527595

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAT

U12 Branch Point Sequence:

CAGCCCCCAACC

Flanking Amino Acid:

RGPPGEQGRKGDRGVPGELG

Intron Amino Acid Position:

1494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

50.9

0.02

1.3

60.4

37.5

Major PPT

74.5

0.55

68.7

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

46.4

-0.2

1.9

54.44

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034786

9517546 - 9532204

14659

ENSAPLT00000044325

9517390 - 9532204

14815