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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9527863_9527963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9527863 - 9527963

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGACT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGGTAC

U12 Branch Point Sequence:

TCCCCGGTACCT

Flanking Amino Acid:

RGAPGPEGEKGEVGAPGRPG

Intron Amino Acid Position:

1521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

76.1

39.5

Major BPS

38.8

-0.7

1.3

26.4

33.2

Major PPT

79.7

0.67

0.7

76.7

25.3

Minor 5ss

33.5

-1.9

3.5

Minor BPS

39.9

-0.6

2.6

60.38

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659