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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9528009_9528100_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9528009 - 9528100

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CTCTCCTCACCA

Flanking Amino Acid:

PGRPGPSGREGAPGPAGPRG

Intron Amino Acid Position:

1536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.8

38.7

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

73.3

0.52

0.9

66.4

34.3

Minor 5ss

29.7

-2.3

2.6

33.4

41.8

Minor BPS

55.3

0.16

1.9

67.11

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659