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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9528249_9528337_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9528249 - 9528337

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCGGT

5'SS Class:

major

3'SS Sequence:

GCTTCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAGCAC

U12 Branch Point Sequence:

GCGCCCAGCACT

Flanking Amino Acid:

PGAPGEPGQPATSVASARGE

Intron Amino Acid Position:

1560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

67.4

Major BPS

41.5

-0.5

1.3

37.8

Major PPT

79.9

0.67

0.8

73.5

31.5

Minor 5ss

38.5

-1.3

3.5

56.3

47.9

Minor BPS

41.9

-0.5

2.1

56.2

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659