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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9529828_9529921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9529828 - 9529921

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

TCCCGCTGAGCC

Flanking Amino Acid:

PGTKGDRGEPGPPGPPGRAV

Intron Amino Acid Position:

1720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.2

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

80.4

0.68

0.7

75.8

26.2

Minor 5ss

-2.5

3.1

35.2

41.4

Minor BPS

43.6

-0.5

52.44

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659