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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9530248_9530320_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9530248 - 9530320

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTGTG

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

TCCCCCTGAGCA

Flanking Amino Acid:

PGPPGLPGERGIEGPRGPPG

Intron Amino Acid Position:

1770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

67.3

44.3

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

95.2

1.02

0.5

91.6

19.5

Minor 5ss

34.8

-1.7

3.4

40.1

45.9

Minor BPS

50.9

0.02

1.8

61.78

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659