Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_9531165_9531320_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9531165 - 9531320

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

CCTCCGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAG

U12 Branch Point Sequence:

TGGTTCACAGCC

Flanking Amino Acid:

DGKPGLNGKNGEDGTPGEDG

Intron Amino Acid Position:

1872

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

68.8

43.8

Major BPS

53.7

0.09

1.5

38.9

Major PPT

75.4

0.57

0.8

68.5

31.8

Minor 5ss

31.1

-2.2

2.6

32.7

34.9

Minor BPS

44.3

-0.4

56.22

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034786

9517546 - 9532204

14659

ENSAPLT00000044325

9517390 - 9532204

14815