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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9531357_9531480_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9531357 - 9531480

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTCCCC

Flanking Amino Acid:

DGTPGEDGRKGDKGDAGAPG

Intron Amino Acid Position:

1884

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

81.6

0.71

0.7

73.2

31.7

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

44.1

-0.4

3.6

72.92

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034786

9517546 - 9532204

14659

ENSAPLT00000044325

9517390 - 9532204

14815