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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9531866_9531979_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9531866 - 9531979

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGTAT

U12 Branch Point Sequence:

TTTTGCTGTATT

Flanking Amino Acid:

PGLRGVAGPKGDPGEPGPRG

Intron Amino Acid Position:

1943

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

46.5

-0.2

1.5

45.3

47.5

Major PPT

77.2

0.61

0.9

73.7

40.6

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

52.1

0.15

2.2

80.68

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044325

9517390 - 9532204

14815

ENSAPLT00000034786

9517546 - 9532204

14659