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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9550019_9550766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9550019 - 9550766

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

AAACATCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAA

U12 Branch Point Sequence:

TTCTTCCAAACA

Flanking Amino Acid:

LTKILYLINQGEHLGVMEAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

62.7

0.32

1.2

33.2

Major PPT

62.4

0.28

51.9

42.5

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

53.8

0.12

71.21

41.3

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002947

9548695 - 9566336

17642

ENSAPLT00000030315

9547205 - 9566566

19362