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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9550839_9551287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9550839 - 9551287

Intron Length:

449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTTGCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

ATCCCCTTAACT

Flanking Amino Acid:

AMTKLFQSNDPTLRRMCYLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

74.7

41.5

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

70.5

0.46

0.9

65.2

36.3

Minor 5ss

40.3

-1.1

3.1

54.9

42.3

Minor BPS

81.1

1.05

1.1

88.17

36.6

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642