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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9551368_9551657_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9551368 - 9551657

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCAC

5'SS Class:

major

3'SS Sequence:

TGTTTCCCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

TGTTTCCCACCA

Flanking Amino Acid:

IAEDVIIVTSSLTKDMTGKD

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.3

72.3

39.5

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

0.56

0.9

67.9

38.9

Minor 5ss

29.9

-2.3

2.7

35.6

Minor BPS

46.6

-0.2

2.1

64.86

41.3

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642