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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9551963_9553180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9551963 - 9553180

Intron Length:

1218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TGTCTCTACCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTGTCTCTACCC

Flanking Amino Acid:

VSSSALVSSLHLLKTSYDVV

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

71.5

38.5

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

73.6

0.53

0.9

39.9

Minor 5ss

34.1

-1.8

3.5

46.6

44.1

Minor BPS

54.4

0.12

70.56

41.2

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642