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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9553268_9553367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9553268 - 9553367

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTAACAC

U12 Branch Point Sequence:

TTTCCCTGCACA

Flanking Amino Acid:

AASSDNIMVQYHALGLLYHV

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

75.1

35.1

Major BPS

47.4

-0.1

1.2

55.1

40.5

Major PPT

76.7

0.6

0.9

72.1

32.6

Minor 5ss

32.4

-2

3.2

42.3

44.8

Minor BPS

61.1

0.34

1.9

78.11

38.1

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642