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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9553526_9554116_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9553526 - 9554116

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTGTTTTAATT

Flanking Amino Acid:

ASKLLEEEAGSRDSPLFDFI

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.5

0.75

0.8

81.6

30.5

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

67.3

0.62

1.4

78.3

39.3

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642