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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9554251_9554454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9554251 - 9554454

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGCG

5'SS Class:

strong_major

3'SS Sequence:

CCTCACCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

GTTTCCTCACCT

Flanking Amino Acid:

TAKELAPAVSVLQLFCSSPK

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

72.1

37.7

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

76.3

0.59

0.8

31.1

Minor 5ss

32.4

-2

3.2

41.3

45.2

Minor BPS

65.9

0.58

1.9

85.32

40.8

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002947

9548695 - 9566336

17642

ENSAPLT00000030315

9547205 - 9566566

19362