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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9555146_9555642_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9555146 - 9555642

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TCTTTCTGACCT

Flanking Amino Acid:

FMSEISDEFKVVVVQAINAL

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

76.2

39.3

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

80.6

0.69

0.7

73.6

31.5

Minor 5ss

37.6

-1.4

3.3

41.4

Minor BPS

61.4

0.44

1.8

80.07

42.1

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642