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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9555739_9557207_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9555739 - 9557207

Intron Length:

1469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAG

U12 Branch Point Sequence:

TCCAGCTGAGCC

Flanking Amino Acid:

NFLFTMLREEGGFEYKRAIV

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.7

1.1

0.7

87.9

29.3

Major BPS

60.1

0.25

1.6

60.7

45.9

Major PPT

73.7

0.53

0.8

35.9

Minor 5ss

43.8

-0.7

2.8

57.8

46.8

Minor BPS

43.1

-0.5

2.1

51.67

45.2

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642