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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9557452_9557831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9557452 - 9557831

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

ACTTGTGCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TGTTTGCTAATT

Flanking Amino Acid:

VVLEHEEVRAGAVSALAKFG

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

68.6

0.42

0.9

61.7

39.5

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

49.7

0.06

2.3

76.83

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002947

9548695 - 9566336

17642

ENSAPLT00000030315

9547205 - 9566566

19362