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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9559652_9559755_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9559652 - 9559755

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATACAA

5'SS Class:

major

3'SS Sequence:

CTTCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAG

U12 Branch Point Sequence:

GTTTCAGTGACC

Flanking Amino Acid:

KALNAGYILNGLTVSIPGLE

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

62.4

37.6

Major BPS

58.3

0.21

1.7

71.4

45.1

Major PPT

77.1

0.61

0.8

68.8

37.1

Minor 5ss

31.5

-2.1

3.1

36.3

41.7

Minor BPS

51.1

0.02

2.3

71.99

39.2

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642