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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9560359_9560733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9560359 - 9560733

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTGA

5'SS Class:

major

3'SS Sequence:

TCCTCTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGGCAA

U12 Branch Point Sequence:

GGTTGGGGAAGG

Flanking Amino Acid:

VAATRQEIFQEQLGAIPEFR

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

68.3

39.5

Major BPS

43.7

-0.3

1.3

47.1

37.9

Major PPT

80.2

0.68

0.8

37.9

Minor 5ss

42.6

-0.8

56.2

47.9

Minor BPS

29.9

-1.6

2.7

37.22

44.8

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642