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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9562050_9563015_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9562050 - 9563015

Intron Length:

966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACAGT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCATCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

CCTCCCCCATCT

Flanking Amino Acid:

VALSEEDPTAVACTFSCMMK

Intron Amino Acid Position:

714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

75.1

41.1

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

71.2

0.48

0.8

61.2

Minor 5ss

40.5

-1.1

3.1

57.9

46.4

Minor BPS

44.1

-0.3

2.1

62.42

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642